Hi Stefan,
Thank you for the information, now I see the point.
Did you by any chance try any other DBMSs with your "non-standard"
workload?
If so, how do those experiences and limitations compare to MonetDB?
I did not run tests over conventional DBMSs because they have stricter limits compared to MonetDB (e.g. Postgres is limited to 1600 columns), but only over array DBMSs or math packages. Obviously, their column scalability is better, but they can not handle RA that efficiently.
Best regards, Oksana
On Tue, 16 Oct 2018 at 12:16, users-list-request@monetdb.org wrote:
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Today's Topics:
- Re: Column limit (Oxana Dolmatova)
- Re: Column limit (Stefan Manegold)
Message: 1 Date: Mon, 15 Oct 2018 17:14:14 +0200 From: Oxana Dolmatova oxana.dolmatova@gmail.com To: E.Rozenberg@cwi.nl Cc: users-list@monetdb.org Subject: Re: Column limit Message-ID: <CAJJ2wAQi+4S+= e9BfbStuJxD7izNh8z-mcBF8FYKxagjj5oRkA@mail.gmail.com> Content-Type: text/plain; charset="utf-8"
Hi Eyal,
Sorry for the late reply. Yes, there is no problem with large number of columns in sparse representation of arrays (i.e., dimension, dimension, value). However, in order to perform relational operations, this structure should be pivoted first. When matrices are represented by tables, both algebras can be applied to the same object, so I'm specifically looking for the main bottleneck of processing hundreds of thousands of columns in MonetDB.
Best regards, Oksana
On Wed, 10 Oct 2018 at 13:40, Eyal Rozenberg E.Rozenberg@cwi.nl wrote:
If you want to model an NxM matrix of elements of type MYTYPE in a DBMS (not just MonetDB), you would typically have a table with 3 columns:
CREATE TABLE my_matrix ( "row" INTEGER NOT NULL, "col" INTEGER NOT NULL, "cell_value" MYTYPE NOT NULL, PRIMARY KEY ("row", "col") );
of length N x M.
Anyways, I'm not the expert on Arrays in our group so I'll let others chime in.
Eyal
On 10/10/2018 13:01, Oxana Dolmatova wrote:
Hello,
Thank you for all the replies and information! The version is 11.23, plus I'm using the cloud platform
with 4cpu-16ram-hpc.
The number of rows was just 1K for 15K attributes in a table. I understand that MonetDB was made with no intention to create and process tables with that many columns. But I'm interested in matrix operations integration, so I would like to know what is the main bottleneck to process such data (matrix-like sized) in the system.
Best regards, Oksana
On Tue, 9 Oct 2018 at 21:02, Eyal Rozenberg <eyalroz@technion.ac.il mailto:eyalroz@technion.ac.il> wrote:
I'll add two observations to what Zhang Ying said. 1. Internally in MonetDB, the index of a column (or a BAT) inMonetDB's
BBP (BAT Buffer Pool) is a signed 32-bit integer (on mostplatforms), so
there isn't a theoretical problem having more than 15,000 columns;but
MonetDB was not designed with that many tables in mind. The "long dimension" is expected to be the length of columns. 2. When you have as many as 15,000 columns, you're not simplyfinding
more attributes of the same items. So, for example, a person has afirst
name, last name, year of birth, etc. etc. - but after severaldozens
of
these you're probably adding columns such as "data relevant to this person at point X", "data relevant to this person at point Y" andso
on.
In your case, I'm guessing you have a lot of points and hence a lotof
columns with data for your different items. What you shouldconsider
doing instead is having an extra "coordinate" column. Thus, in the example I gave, I would drop most of the columns, in favor of asecond
table named "person_data". This table's columns would be"person_id"
(or
some other key columns), "sample_point" and "value". Thus insteadof
M
columns and N records you would have N x M records with 3 columns. Eyal On 09/10/2018 16:50, Ying Zhang wrote: > Hai Oksana, > > A.f.a.I.k., there is no explicit limit on the #columns you canput
in a relation (did you mean ?table??). The reason that mserver5 stopped responding is probably because it is busy with I/O. > > A long time ago, I once tried to create 1M tables, each with 3 columns. After about a day or something, MonetDB has created ~400K tables, and I could hear my HDD being constantly busy. MonetDB was still working, but that was already a sufficient evidence that that idea wasn?t going to work. > > So the question is actually what do you want to achieve? > > Regards, > Jennie > > >> On 9 Oct 2018, at 13:43, Oxana Dolmatova <oxana.dolmatova@gmail.com <mailto:oxana.dolmatova@gmail.com>>wrote:
>> >> Hello, >> >> Could you tell the limitation for number of columns in arelation
and the main reason for that limitation. So far I could create relations with up to 15000 columns. When the number of columns is bigger mserver5 stops responding. >> >> Thank you and best regards, >> Oksana Dolmatova >> _______________________________________________ >> users-list mailing list >> users-list@monetdb.org <mailto:users-list@monetdb.org> >> https://www.monetdb.org/mailman/listinfo/users-list > > _______________________________________________ > users-list mailing list > users-list@monetdb.org <mailto:users-list@monetdb.org> > https://www.monetdb.org/mailman/listinfo/users-list >-- Best regards, Oksana Dolmatova
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-- Best regards, Oksana Dolmatova