[Monetdb-developers] Error compiling MEL w/ flex 2.5.33 & bison 2.3

Riham r.abdelkader at ewi.utwente.nl
Mon Oct 2 18:20:28 CEST 2006


HI Stefan,

You are right, I totally forgot I had to do this. Now I'm getting this 
error when I execute make for monetdb:

================================================================
kader at wlan139064:~/home/MonetDB_XQuery_CVS/build/MonetDB> make
[..........]
make[6]: Entering directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src/modules/plain'
make  all-am
make[7]: Entering directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src/modules/plain'
/bin/sh ../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. 
-I../../../../../src/MonetDB/src/modules/plain -I../../.. 
-I../../../../../src/MonetDB/src/modules/plain -I../../common 
-I../../../../../src/MonetDB/src/modules/plain/../../common -I../../gdk 
-I../../../../../src/MonetDB/src/modules/plain/../../gdk -I../../monet 
-I../../../../../src/MonetDB/src/modules/plain/../../monet         
-DLIBSYS  -g -O2 -std=c99 -Wall -W -Werror-implicit-function-declaration 
-Werror -Wno-unused-function -Wno-unused-label  -D_REENTRANT -c -o 
lib_sys_la-sys.lo `test -f 'sys.c' || echo 
'../../../../../src/MonetDB/src/modules/plain/'`sys.c
 gcc -DHAVE_CONFIG_H -I. -I../../../../../src/MonetDB/src/modules/plain 
-I../../.. -I../../../../../src/MonetDB/src/modules/plain -I../../common 
-I../../../../../src/MonetDB/src/modules/plain/../../common -I../../gdk 
-I../../../../../src/MonetDB/src/modules/plain/../../gdk -I../../monet 
-I../../../../../src/MonetDB/src/modules/plain/../../monet -DLIBSYS -g 
-O2 -std=c99 -Wall -W -Werror-implicit-function-declaration -Werror 
-Wno-unused-function -Wno-unused-label -D_REENTRANT -c sys.c  -fPIC 
-DPIC -o .libs/lib_sys_la-sys.o
../../../../../src/MonetDB/src/modules/plain/sys.mx: In function 
'view_gdk_cpu':
../../../../../src/MonetDB/src/modules/plain/sys.mx:1337: error: 
'CLK_TCK' undeclared (first use in this function)
../../../../../src/MonetDB/src/modules/plain/sys.mx:1337: error: (Each 
undeclared identifier is reported only once
../../../../../src/MonetDB/src/modules/plain/sys.mx:1337: error: for 
each function it appears in.)
make[7]: *** [lib_sys_la-sys.lo] Error 1
make[7]: Leaving directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src/modules/plain'
make[6]: *** [all] Error 2
make[6]: Leaving directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src/modules/plain'
make[5]: *** [all-recursive] Error 1
make[5]: Leaving directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src/modules'
make[4]: *** [all] Error 2
make[4]: Leaving directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src/modules'
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src'
make[2]: *** [all] Error 2
make[2]: Leaving directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory 
`/local/kader/home/MonetDB_XQuery_CVS/build/MonetDB'
make: *** [all] Error 2
=================================================================================

Any Idea?

Thanks again.
Riham


Stefan Manegold wrote:
> Hi Riham,
>
> you need to set your PYTHONPATH to make python find the autogen module.
>
> >From buildtools/autogen/README:
> ========
> If you use the --prefix option or otherwise install autogen in a
> different place, you may have to set your PYTHONPATH environment
> variable accordingly.  The directory which needs to be added is
> <install-dir-prefix>/lib(64)/python<python-version>/site-packages, where
> <python-version is the version of Python used (e.g. 2.4).
> ========
>
> Stefan
>
> On Mon, Oct 02, 2006 at 05:45:17PM +0200, Riham wrote:
>   
>> Hi Stefan,
>>
>> I have in fact commented both lines #if/#endif in mel.mx file, but have 
>> kept everything in between. This way it worked and did not get the error 
>> again. But when I bootstrap monetdb i get the followiing message:
>> ================================================================
>> kader at wlan139064:~/home/MonetDB_XQuery_CVS/src/MonetDB> ./bootstrap
>> automake 1.9.6 is 1.5 or newer. Good.
>> autoconf 2.60 is 2.57 or newer. Good.
>> libtool 1.5.22 is 1.4 or newer. Good.
>> Python 2.4.3 is 2.0.0 or newer. Good.
>> Traceback (most recent call last):
>>  File 
>> "/local/kader/home/MonetDB_XQuery_CVS/monetdb_xquery/bin/autogen.py", 
>> line 29, in ?
>>    from autogen import am
>> ImportError: No module named autogen
>> =================================================================
>> Of course, the configure file is not generated afterwards and thus could 
>> not continue the deployment.
>>
>> I am working on Suse10.2.
>>
>> Thank you for trying to help,
>> Riham
>>
>>
>> Stefan Manegold wrote:
>>     
>>> On Mon, Oct 02, 2006 at 12:47:39PM +0200, Niels Nes wrote:
>>>  
>>>       
>>>> On Mon, Oct 02, 2006 at 12:32:22PM +0200, Riham wrote:
>>>>    
>>>>         
>>>>> Hi,
>>>>>
>>>>> I am a new PhD student at the University of Twente. I am working with 
>>>>> Dr. Maurice van Keulen on Optimizing Pathfinder queries. I was 
>>>>> installing Monet on my new linux system and I got the following error:
>>>>>
>>>>> ===========================================================================
>>>>> kader at netloosewi840:~/home/MonetDB_XQuery_CVS/build/buildtools> make
>>>>> cd 
>>>>> ""/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/../../src/buildtools"/autogen" 
>>>>> && python setup.py build
>>>>> running build
>>>>> running build_py
>>>>> running build_scripts
>>>>> cd _MX && make MAKE=make all
>>>>> make[1]: Entering directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MX'
>>>>> make  all-am
>>>>> make[2]: Entering directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MX'
>>>>> make[2]: Nothing to be done for `all-am'.
>>>>> make[2]: Leaving directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MX'
>>>>> make[1]: Leaving directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MX'
>>>>> cd _MEL && make MAKE=make all
>>>>> make[1]: Entering directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL'
>>>>> make  all-am
>>>>> make[2]: Entering directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL'
>>>>> g++  -g    -o mel   any_arg.o atom_arg.o atom.o atomops.o bat_arg.o 
>>>>> builtin.o command.o debug.o depend.o dependency.o epilogue.o FileInfo.o 
>>>>> glue.o html.o iterator.o link.o ListIterator.o mel.o mel.tab.o mel.yy.o 
>>>>> mil.o module.o object.o operator.o ops.o prelude.o proto.o symbol.o 
>>>>> symtable.o type_arg.o use.o var_arg.o
>>>>> mel.tab.o: In function `semerror()':
>>>>> /local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL/mel.yy:471: 
>>>>> undefined reference to `yylineno'
>>>>> /local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL/mel.yy:472: 
>>>>> undefined reference to `yylineno'
>>>>> mel.tab.o: In function `yyparse()':
>>>>> /local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL/mel.yy:59: 
>>>>> undefined reference to `yylineno'
>>>>> /local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL/mel.yy:67: 
>>>>> undefined reference to `yylineno'
>>>>> /local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL/mel.yy:131: 
>>>>> undefined reference to `yylineno'
>>>>> mel.yy.o:/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL/mel.ll:253: 
>>>>> more undefined references to `yylineno' follow
>>>>> collect2: ld returned 1 exit status
>>>>> make[2]: *** [mel] Error 1
>>>>> make[2]: Leaving directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL'
>>>>> make[1]: *** [all] Error 2
>>>>> make[1]: Leaving directory 
>>>>> `/local/kader/home/MonetDB_XQuery_CVS/build/buildtools/_MEL'
>>>>> make: *** [all] Error 2
>>>>> ===========================================================================
>>>>>
>>>>> The flex and bison versions I have are 2.5.33 and 2.3 respectively.
>>>>> I was advised by Jan Flokstra to report the error to you. I hope you 
>>>>> have sufficient information to know the origin of the problem, if not 
>>>>> please let me know.
>>>>>
>>>>> Thank you for your help,
>>>>> Riham Abdel Kader.
>>>>>      
>>>>>           
>>>> As of flex 2.5.31 the yylineno was defined by flex. Normaly we define
>>>> it our selfs.
>>>>
>>>> You could try to patch the following line from mel.mx
>>>>
>>>> #if !defined(YY_FLEX_SUBMINOR_VERSION) || YY_FLEX_SUBMINOR_VERSION < 5
>>>> /* flex 2.5.31 declares yylineno.  I don't know which other versions
>>>>   do as well. */
>>>> int yylineno;
>>>> #endif
>>>>
>>>> Simply removed the #if/#endif should work. A better solution is to know
>>>> which range between 2.5.6 and 2.5.31/32 have a yylineno defined. And
>>>> fix the second part of the #ifdef.
>>>>
>>>> Niels
>>>>    
>>>>         
>>> Niels, Riham,
>>>
>>> I haven't analysed the problem any further, yet, but I think it might also
>>> be related to bison 2.3 or the combination of bison 2.3 and flex 2.5.33. In
>>> out nightly testing pool (cf., http://monetdb.cwi.nl/Development/TestWeb/),
>>> we use flex 2.5.4 & flex 2.5.33 and bison 1.875, 2.0, 2.1, 2.2, and
>>> everything works fine. We don't use bison 2.3, yet ...
>>>
>>> Riham,
>>>
>>> which linux distribution (name & version) are you using?
>>>
>>> Does Niels' patch work for you?
>>>
>>>
>>> Stefan
>>>
>>>  
>>>       
>
>   




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