users-list November 2010

users-list@monetdb.org

16 participants
13 discussions

[MonetDB-users] MonetDB/XQuery Installation

by Rob Fynes

Hello, Apologies if this is the improper place to be asking this. I'm a new user to MonetDB, and I'm having trouble installing MonetDB/XQuery on Ubuntu 10.04 32-bit. Actually, the installation did seem to succeed (running the auto install script from the super source tarball) and I can start MServer, but with the error: # MonetDB Server v4.40.2 # based on GDK v1.40.2 # not released # Copyright (c) 1993-July 2008, CWI. All rights reserved. # Copyright (c) August 2008-2010, MonetDB B.V.. All rights reserved. # Compiled for i686-pc-linux-gnu/32bit with 32bit OIDs; dynamically linked. # Detected 3.919 GiB (4208013312 bytes) main-memory. # Visit http://monetdb.cwi.nl/ for further information. !ERROR: moduleClient: module(pathfinder) load error. The problem, its seems anyway, is during the configuration of pathfinder: ... ... checking for signal.h... yes checking return type of signal handlers... (cached) void checking for strings.h... (cached) yes checking for strcasecmp... yes checking for xml2-config.32... no checking for xml2-32-config... no checking for xml2-config... no checking for libxml/parser.h... no configure: error: in `/home/rob/MonetDB': configure: error: The libxml2 XML parsing library and/or include files were not found or you have requested to not use it. This is required dependence, core components like the XML Schema import functionality depends on it. See `config.log' for more details. I do have libxml2 installed (by default with Lucid). I've run the pathfinder configure script a few times, with the option --with-libxml2=*some variations*, but I'm not really confident about what I'm doing. I was wondering if anyone could point me in the right direction. Thanks. -Rob

11 years, 7 months

[MonetDB-users] Granting TMP Table Creation Privileges to User

by Reeves, Matthew J.

I'm not sure what I'm missing but how does one grant permissions to a user to create temporary tables? I'm totally stumped. Thanks, Matt

11 years, 8 months

[MonetDB-users] issue with concurrent access to MonetDB/SQL via JDBC

by Wouter Alink

Dear users, I'm currently struggling with concurrent access to MonetDB/SQL via JDBC. Version: MonetDB server v5.20.4 (64-bit), based on kernel v1.38.4 (64-bit oids). I might still have some concurrency issues with my own code, but somehow I frequently end up with the following error message: (while stress-testing by querying with 10 threads at the same time) class java.sql.SQLException: TypeException:user.s3_1[448]:'user.contains' undefined in: _1933:any := user.contains(_1929:str, _1931:str, _474:bit) TypeException:user.s3_1[449]:'bat.insert' undefined in: _1934:any := bat.insert(_1923:bat[:oid,:bit], _1928:oid, _1933:any) TypeException:user.s3_1[645]:'user.contains' undefined in: _1946:any := user.contains(_1942:str, _1944:str, _474:bit) TypeException:user.s3_1[646]:'bat.insert' undefined in: _1947:any := bat.insert(_1938:bat[:oid,:bit], _1941:oid, _1946:any) TypeException:user.s3_1[1042]:'user.contains' undefined in: _1959:any := user.contains(_1955:str, _1957:str, _474:bit) TypeException:user.s3_1[1043]:'bat.insert' undefined in: _1960:any := bat.insert(_1951:bat[:oid,:bit], _1954:oid, _1959:any) TypeException:user.s3_1[1226]:'user.contains' undefined in: _1974:any := user.contains(_1970:str, _1972:str, _474:bit) TypeException:user.s3_1[1227]:'bat.insert' undefined in: _1975:any := bat.insert(_1964:bat[:oid,:bit], _1969:oid, _1974:any) SQLException:SQLengine:Program contains errors nl.cwi.monetdb.jdbc.MonetConnection$ResponseList.executeQuery(MonetConnection.java:2209) nl.cwi.monetdb.jdbc.MonetConnection$ResponseList.processQuery(MonetConnection.java:1968) nl.cwi.monetdb.jdbc.MonetStatement.internalExecute(MonetStatement.java:506) nl.cwi.monetdb.jdbc.MonetStatement.execute(MonetStatement.java:347) nl.cwi.monetdb.jdbc.MonetStatement.executeUpdate(MonetStatement.java:542) Does anyone else have experienced such error messages before, or does anyone have a clue to where to look? (like too many open connections, concurrent access of the same connection, querying a closed connection, or perhaps a bug inside monetdb)? Thanks, Wouter

11 years, 8 months

[MonetDB-users] MonetDB Debain and RDF

by Andreas Harth

Hi, I'd like to use Lefteris' RDF package on Debian. What do I have to do to create and connect to a database as user on Debian? I've installed the following packages: # dpkg -l | grep -e monetdb ii libmonetdb-client1 1.40.1-20101110 MonetDB database client libraries ii libmonetdb1 1.40.1-20101110 database system for high-performance applications, libraries ii libmonetdb5-server5 5.22.1-20101110 MonetDB database server version 5, libraries ii libmonetdb5-sql2 2.40.1-20101110 MonetDB SQL libraries for monetdb5-server ii monetdb-client 1.40.1-20101110 MonetDB database client ii monetdb5-server 5.22.1-20101110 MonetDB database server version 5 ii monetdb5-sql 2.40.1-20101110 MonetDB SQL support for monetdb5 I can start MonetDB: # /etc/init.d/monetdb5-sql start Starting MonetDB SQL server: merovingian. When I try do create the tables (as a user): $ mclient -lsql create_tables.sql user(aharth): password: merovingian: please specify a database $ $ mclient -lsql create_tables.sql -d demo user(aharth): password: merovingian: internal error while starting mserver, please refer to the logs $ The log says: 2010-11-25 16:20:19 MSG merovingian[3685]: starting database 'demo', up min/avg/max: 3s/4s/5s, crash average: 0.00 0.00 0.00 (2-2=0) 2010-11-25 16:20:19 ERR merovingian[3685]: client error: cannot start database 'demo': no .vaultkey found (did you create the database with `monetdb create demo`?) I'm stuck here. How can I create a database as a user? $ monetdb create demo2 permission denied $ As root, I only can create a database in maintainance mode: # monetdb create demo2 created database in maintenance mode: demo2 # Any pointers to howto's that'll help? Cheers, Andreas.

11 years, 8 months

Re: [MonetDB-users] Querying date type column in MonetDB

by Stefan Manegold

I see --- if you consider it a bug, please file a detailed bug report including information & instructions to reporduce the problem as well as infornmation about the exact MonetDB version and OS you're using via http://bugs.MonetDB.org/ Stefan ----- Oorspronkelijk bericht ----- Van: Freddy Priyatna <freddy.priyatna(a)gmail.com> Verzonden: maandag 25 oktober 2010 16:32 Aan: Communication channel for MonetDB users <monetdb-users(a)lists.sourceforge.net> Onderwerp: Re: [MonetDB-users] Querying date type column in MonetDB Hi Stefan, Nope, the name of the column is "deliveryDays" :) Freddy 2010/10/25 Stefan Manegold <Stefan.Manegold(a)cwi.nl> > Hi Freddy, > > I don't think that the error you experience is triggered by the column > type, but rather by the fact that your date column ha? a name - say "date" - > that is a reserved key word in SQL an hence needs to be double-quoted > according to the SQL standard (this is not a MonetDB specific choice, but a > "feature" of the SQL standard) --- not knowing your table & column names, I > can only guess, though ... > > Stefan > > > ----- Oorspronkelijk bericht ----- > Van: Freddy Priyatna <freddy.priyatna(a)gmail.com> > Verzonden: maandag 25 oktober 2010 16:03 > Aan: MonetDB-users <monetdb-users(a)lists.sourceforge.net> > Onderwerp: [MonetDB-users] Querying date type column in MonetDB > > Dear All, > > I am new to MonetDB, so most likely my question will look obvious. > > I would like to ask, how can columns with date type is queried in monetdb. > Based on my experience, it seems that date type columns need special > treatment. It seems that the only way to query them is with the syntax > "column_name" while other columns seems to work with the format > table_name.column_name without the need of double quote. When I tried to > query date column with the syntax table_name.column_name, it gave me an > error "no such column" > > So my question is, is it true that the only way to query date columns is > using "column_name" format? Another question will be, what happen if I need > to query same name columns coming from different table? > > Thanks in advance, > Freddy > > > ------------------------------------------------------------------------------ > Nokia and AT&T present the 2010 Calling All Innovators-North America > contest > Create new apps & games for the Nokia N8 for consumers in U.S. and Canada > $10 million total in prizes - $4M cash, 500 devices, nearly $6M in > marketing > Develop with Nokia Qt SDK, Web Runtime, or Java and Publish to Ovi Store > http://p.sf.net/sfu/nokia-dev2dev > _______________________________________________ > MonetDB-users mailing list > MonetDB-users(a)lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/monetdb-users >

11 years, 8 months

[MonetDB-users] Copy into issues with mixed ascii / hex data

by paulr135

I have a tab-delimited data file that is mostly ascii, but has a few hex characters in it. For example: ... 3263640152 ABC<99> ... where <99> is a hex value for (tm) - trademark. When I try and load this data file into monetdb, I get the following error: [root@bidbtest ~]# /usr/local/MonetDB/bin/mclient -lsql --database=myschema -t -s "COPY 20603 records into test_table from '/tmp/testdata.txt' using delimiters '\t','\n','\"' null as '';" user(root):monetdb password: MAPI = (monetdb) /usr/local/MonetDB/var/MonetDB5/dbfarm/mapi_socket QUERY = COPY 20603 records into test_table from '/tmp/testdata.txt' using delimiters '\t','\n','"' null as ''; ERROR = !SQLException:importTable:value 'failed to import table Timer 790.415 msec The table def is: CREATE TABLE creative_dim ( id bigint NOT NULL, headline varchar(100) DEFAULT NULL ) How can I go about loading this file? Ideally, I would like to get these characters loaded as is. I saw that mclient has a -E flag that accepts an encoding type. However, I'm not sure what to set it to for a file with ascii / hex data. A complicating factor is that I don't know all the hex characters that are in my file. I luckily spotted the <99>/tm one above as it was one of the first lines in the file. But after replacing all instances of that character with the empty string, I still get a similar error to what I pasted above. I manually paged through the file and found different hex characters. It isn't practical for me to page through an entire file and monetdb doesn't tell me which line number the problem is on. By the way, I am using MonetDB v5.20.5. Thanks for the help! -- View this message in context: http://old.nabble.com/Copy-into-issues-with-mixed-ascii---hex-data-tp302389… Sent from the monetdb-users mailing list archive at Nabble.com.

11 years, 8 months

[MonetDB-users] compiling from hg

by Dean Serenevy

Hello, I am attempting to compile from mercurial sources. I have tried from the Oct2010_1 tag as well as tip and both error out at the same point (I ran de-bootstrap between attempts). As far as I can tell i have all prerequisites installed. Full command output is included at the end of the message. Can anyone tell me what I am doing wrong? Thaks, Dean [MonetDB.hg/buildtools] (hg:default)$ hg update tip 0 files updated, 0 files merged, 0 files removed, 0 files unresolved [MonetDB.hg/buildtools] (hg:default)$ ./bootstrap [MonetDB.build/buildtools]$ ../MonetDB.hg/buildtools/configure --prefix=/opt/MonetDB --enable-burg --enable-mel --enable-debug=no --enable-assert=no --enable-optimize=yes [MonetDB.build/buildtools]$ make -j4 ... g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT mel.yy.o -MD -MP -MF .deps/mel.yy.Tpo -c -o mel.yy.o mel.yy.cc y.tab.c:178:1: warning: "MEL_MODULE" redefined In file included from /home/duelafn/MonetDB.hg/buildtools/mel/command.h:26, from /home/duelafn/MonetDB.hg/buildtools/mel/mel.yy:47: /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:1:1: warning: this is the location of the previous definition y.tab.c:179:1: warning: "MEL_PRELUDE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:2:1: warning: this is the location of the previous definition y.tab.c:180:1: warning: "MEL_EPILOGUE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:3:1: warning: this is the location of the previous definition y.tab.c:181:1: warning: "MEL_END" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:4:1: warning: this is the location of the previous definition y.tab.c:182:1: warning: "MEL_COMMAND" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:5:1: warning: this is the location of the previous definition y.tab.c:183:1: warning: "MEL_OPERATOR0" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:6:1: warning: this is the location of the previous definition y.tab.c:184:1: warning: "MEL_OPERATOR" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:7:1: warning: this is the location of the previous definition y.tab.c:185:1: warning: "MEL_OPERATOR1" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:8:1: warning: this is the location of the previous definition y.tab.c:186:1: warning: "MEL_FIXEDATOM" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:9:1: warning: this is the location of the previous definition y.tab.c:187:1: warning: "MEL_ATOM" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:10:1: warning: this is the location of the previous definition y.tab.c:188:1: warning: "MEL_USE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:11:1: warning: this is the location of the previous definition y.tab.c:189:1: warning: "MEL_ATOMOP" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:12:1: warning: this is the location of the previous definition y.tab.c:190:1: warning: "MEL_STRING" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:13:1: warning: this is the location of the previous definition y.tab.c:191:1: warning: "MEL_IDENTIFIER" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:14:1: warning: this is the location of the previous definition y.tab.c:192:1: warning: "MEL_USED" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:15:1: warning: this is the location of the previous definition y.tab.c:193:1: warning: "MEL_NUMBER" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:16:1: warning: this is the location of the previous definition y.tab.c:194:1: warning: "MEL_ANY" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:17:1: warning: this is the location of the previous definition y.tab.c:195:1: warning: "MEL_BAT" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:18:1: warning: this is the location of the previous definition y.tab.c:196:1: warning: "MEL_TYPE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:19:1: warning: this is the location of the previous definition y.tab.c:197:1: warning: "MEL_VOID" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:20:1: warning: this is the location of the previous definition y.tab.c:198:1: warning: "MEL_BUILTIN" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:21:1: warning: this is the location of the previous definition y.tab.c:199:1: warning: "MEL_OBJECT" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:22:1: warning: this is the location of the previous definition y.tab.c:200:1: warning: "MEL_VARARGS" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:23:1: warning: this is the location of the previous definition y.tab.c:201:1: warning: "MEL_SEP" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:24:1: warning: this is the location of the previous definition y.tab.c:202:1: warning: "MEL_ITERATOR" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:25:1: warning: this is the location of the previous definition mv -f .deps/glue.Tpo .deps/glue.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT mil.o -MD -MP -MF .deps/mil.Tpo -c -o mil.o mil.cc y.tab.c:150: error: expected identifier before numeric constant y.tab.c:150: error: expected ‘}’ before numeric constant y.tab.c:150: error: expected unqualified-id before numeric constant y.tab.c:175: error: expected declaration before ‘}’ token make[3]: *** [mel.tab.o] Error 1 make[3]: *** Waiting for unfinished jobs.... mv -f .deps/mel.Tpo .deps/mel.Po mv -f .deps/mil.Tpo .deps/mil.Po mv -f .deps/mel.yy.Tpo .deps/mel.yy.Po make[3]: Leaving directory `/home/duelafn/MonetDB.build/mel' make[2]: *** [all] Error 2 make[2]: Leaving directory `/home/duelafn/MonetDB.build/mel' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/duelafn/MonetDB.build' make: *** [all] Error 2 FULL COMMAND OUTPUT [MonetDB.hg/buildtools] (hg:default)$ ./bootstrap configure.ac:24: installing `./install-sh' configure.ac:24: installing `./missing' Makefile.am: installing `./depcomp' configure.ac:24: installing `./install-sh' configure.ac:24: installing `./missing' Makefile.am: installing `./depcomp' configure.ac:24: installing `./install-sh' configure.ac:24: installing `./missing' Makefile.am: installing `./depcomp' configure.ac:25: installing `./install-sh' configure.ac:25: installing `./missing' [MonetDB.build/buildtools]$ ../MonetDB.hg/buildtools/configure --prefix=/opt/MonetDB --enable-burg --enable-mel --enable-debug=no --enable-assert=no --enable-optimize=yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for python... /usr/bin/python configure: WARNING: unrecognized options: --enable-burg, --enable-mel, --enable-debug, --enable-assert, --enable-optimize checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make sets $(MAKE)... (cached) yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... gcc3 checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking for lockfile... echo checking for flex... flex checking lex output file root... lex.yy checking lex library... -lfl checking whether yytext is a pointer... yes checking for bison... bison -y checking whether ln -s works... yes checking for rm... rm -f checking for mv... mv -f checking for flex version... flex 2.5.35 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking whether time.h and sys/time.h may both be included... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking for iostream... yes checking for cstdio... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for memset... yes checking for strchr... yes checking for strdup... yes checking for strrchr... yes configure: creating ./config.status config.status: creating Makefile config.status: creating mel_config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --enable-burg, --enable-mel, --enable-debug, --enable-assert, --enable-optimize configure: creating ./config.status config.status: creating Makefile config.status: creating autogen/Makefile config.status: creating conf/Makefile config.status: creating conf/Mbootstrap config.status: creating conf/buildtools-config config.status: creating dummy.h === configuring in Mx (/home/duelafn/MonetDB.build/Mx) configure: running /bin/bash ../../MonetDB.hg/buildtools/Mx/configure --disable-option-checking '--prefix=/opt/MonetDB' '--enable-burg' '--enable-mel' '--enable-debug=no' '--enable-assert=no' '--enable-optimize=yes' --cache-file=/dev/null --srcdir=../../MonetDB.hg/buildtools/Mx checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for bash... /bin/bash checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking utime.h usability... yes checking utime.h presence... yes checking for utime.h... yes checking whether stat file-mode macros are broken... no checking for an ANSI C-conforming const... yes checking for size_t... yes checking for ptrdiff_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for utime.h... (cached) yes checking whether utime accepts a null argument... yes checking for vprintf... yes checking for _doprnt... no checking for memset... yes checking for mkdir... yes checking for strchr... yes checking for strcspn... yes checking for strrchr... yes checking for strstr... yes checking for utime... yes checking whether getopt is declared... yes configure: creating ./config.status config.status: creating Makefile config.status: creating mx_config.h config.status: executing depfiles commands === configuring in burg (/home/duelafn/MonetDB.build/burg) configure: running /bin/bash ../../MonetDB.hg/buildtools/burg/configure --disable-option-checking '--prefix=/opt/MonetDB' '--enable-burg' '--enable-mel' '--enable-debug=no' '--enable-assert=no' '--enable-optimize=yes' --cache-file=/dev/null --srcdir=../../MonetDB.hg/buildtools/burg checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for flex... flex checking lex output file root... lex.yy checking lex library... -lfl checking whether yytext is a pointer... yes checking for bison... bison -y checking for lockfile... echo checking for rm... rm -f checking for mv... mv -f checking for flex version... flex 2.5.35 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking stdbool.h usability... yes checking stdbool.h presence... yes checking for stdbool.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for stdbool.h that conforms to C99... (cached) yes checking for _Bool... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking for long long... yes checking for __int64... no checking size of void *... 8 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of __int64... 0 checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for memset... yes checking for strdup... yes configure: creating ./config.status config.status: creating Makefile config.status: creating burg_config.h config.status: executing depfiles commands [MonetDB.build/buildtools]$ make -j4 (CDPATH="${ZSH_VERSION+.}:" && cd ../MonetDB.hg/buildtools && /bin/bash /home/duelafn/MonetDB.hg/buildtools/missing --run autoheader) rm -f stamp-h1 touch ../MonetDB.hg/buildtools/dummy.h.in cd . && /bin/bash ./config.status dummy.h config.status: creating dummy.h config.status: dummy.h is unchanged /usr/bin/make all-recursive make[1]: Entering directory `/home/duelafn/MonetDB.build' Making all in autogen make[2]: Entering directory `/home/duelafn/MonetDB.build/autogen' mkdir -p /home/duelafn/MonetDB.build/autogen/autogen cp ../../MonetDB.hg/buildtools/autogen/setup.py /home/duelafn/MonetDB.build/autogen/setup.py cp ../../MonetDB.hg/buildtools/autogen/autogen.py /home/duelafn/MonetDB.build/autogen/autogen.py cp ../../MonetDB.hg/buildtools/autogen/autogen/am.py /home/duelafn/MonetDB.build/autogen/autogen/am.py cp ../../MonetDB.hg/buildtools/autogen/autogen/msc.py /home/duelafn/MonetDB.build/autogen/autogen/msc.py cp ../../MonetDB.hg/buildtools/autogen/autogen/var.py /home/duelafn/MonetDB.build/autogen/autogen/var.py cp ../../MonetDB.hg/buildtools/autogen/autogen/codegen.py /home/duelafn/MonetDB.build/autogen/autogen/codegen.py cp ../../MonetDB.hg/buildtools/autogen/autogen/__init__.py /home/duelafn/MonetDB.build/autogen/autogen/__init__.py /usr/bin/python setup.py build running build running build_py creating build creating build/lib.linux-x86_64-2.6 creating build/lib.linux-x86_64-2.6/autogen copying autogen/var.py -> build/lib.linux-x86_64-2.6/autogen copying autogen/codegen.py -> build/lib.linux-x86_64-2.6/autogen copying autogen/__init__.py -> build/lib.linux-x86_64-2.6/autogen copying autogen/am.py -> build/lib.linux-x86_64-2.6/autogen copying autogen/msc.py -> build/lib.linux-x86_64-2.6/autogen running build_scripts creating build/scripts-2.6 copying and adjusting autogen.py -> build/scripts-2.6 changing mode of build/scripts-2.6/autogen.py from 644 to 755 make[2]: Leaving directory `/home/duelafn/MonetDB.build/autogen' Making all in Mx make[2]: Entering directory `/home/duelafn/MonetDB.build/Mx' (CDPATH="${ZSH_VERSION+.}:" && cd ../../MonetDB.hg/buildtools/Mx && /bin/bash /home/duelafn/MonetDB.hg/buildtools/Mx/missing --run autoheader) rm -f stamp-h1 touch ../../MonetDB.hg/buildtools/Mx/mx_config.h.in cd . && /bin/bash ./config.status mx_config.h config.status: creating mx_config.h config.status: mx_config.h is unchanged /usr/bin/make all-am make[3]: Entering directory `/home/duelafn/MonetDB.build/Mx' gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Mx.o -MD -MP -MF .deps/Mx.Tpo -c -o Mx.o ../../MonetDB.hg/buildtools/Mx/Mx.c gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Def.o -MD -MP -MF .deps/Def.Tpo -c -o Def.o ../../MonetDB.hg/buildtools/Mx/Def.c gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Form.o -MD -MP -MF .deps/Form.Tpo -c -o Form.o ../../MonetDB.hg/buildtools/Mx/Form.c gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Tok.o -MD -MP -MF .deps/Tok.Tpo -c -o Tok.o ../../MonetDB.hg/buildtools/Mx/Tok.c mv -f .deps/Mx.Tpo .deps/Mx.Po mv -f .deps/Tok.Tpo .deps/Tok.Po gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Code.o -MD -MP -MF .deps/Code.Tpo -c -o Code.o ../../MonetDB.hg/buildtools/Mx/Code.c gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Display.o -MD -MP -MF .deps/Display.Tpo -c -o Display.o ../../MonetDB.hg/buildtools/Mx/Display.c mv -f .deps/Form.Tpo .deps/Form.Po gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Print.o -MD -MP -MF .deps/Print.Tpo -c -o Print.o ../../MonetDB.hg/buildtools/Mx/Print.c mv -f .deps/Display.Tpo .deps/Display.Po gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Io.o -MD -MP -MF .deps/Io.Tpo -c -o Io.o ../../MonetDB.hg/buildtools/Mx/Io.c mv -f .deps/Def.Tpo .deps/Def.Po gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT Sys.o -MD -MP -MF .deps/Sys.Tpo -c -o Sys.o ../../MonetDB.hg/buildtools/Mx/Sys.c mv -f .deps/Print.Tpo .deps/Print.Po gcc -DHAVE_CONFIG_H -I. -I../../MonetDB.hg/buildtools/Mx -g -O2 -MT disclaimer.o -MD -MP -MF .deps/disclaimer.Tpo -c -o disclaimer.o ../../MonetDB.hg/buildtools/Mx/disclaimer.c mv -f .deps/Code.Tpo .deps/Code.Po mv -f .deps/Sys.Tpo .deps/Sys.Po mv -f .deps/disclaimer.Tpo .deps/disclaimer.Po mv -f .deps/Io.Tpo .deps/Io.Po gcc -g -O2 -o Mx Mx.o Def.o Form.o Tok.o Code.o Display.o Print.o Io.o Sys.o disclaimer.o make[3]: Leaving directory `/home/duelafn/MonetDB.build/Mx' make[2]: Leaving directory `/home/duelafn/MonetDB.build/Mx' Making all in mel make[2]: Entering directory `/home/duelafn/MonetDB.build/mel' (CDPATH="${ZSH_VERSION+.}:" && cd /home/duelafn/MonetDB.hg/buildtools/mel && /bin/bash /home/duelafn/MonetDB.hg/buildtools/mel/missing --run autoheader) rm -f stamp-h1 touch /home/duelafn/MonetDB.hg/buildtools/mel/mel_config.h.in cd . && /bin/bash ./config.status mel_config.h config.status: creating mel_config.h config.status: mel_config.h is unchanged /usr/bin/make all-am make[3]: Entering directory `/home/duelafn/MonetDB.build/mel' ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/any_arg.mx /home/duelafn/MonetDB.hg/buildtools/mel/any_arg.mx: ./any_arg.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/atom_arg.mx ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/atom.mx ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/atomops.mx /home/duelafn/MonetDB.hg/buildtools/mel/atom_arg.mx: ./atom_arg.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/bat_arg.mx /home/duelafn/MonetDB.hg/buildtools/mel/atom.mx: ./atom.cc - created /home/duelafn/MonetDB.hg/buildtools/mel/atomops.mx: ./atomops.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/builtin.mx ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/command.mx /home/duelafn/MonetDB.hg/buildtools/mel/bat_arg.mx: ./bat_arg.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/debug.mx ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/depend.mx /home/duelafn/MonetDB.hg/buildtools/mel/builtin.mx: ./builtin.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/dependency.mx /home/duelafn/MonetDB.hg/buildtools/mel/command.mx: ./command.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/epilogue.mx /home/duelafn/MonetDB.hg/buildtools/mel/debug.mx: ./debug.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/FileInfo.mx /home/duelafn/MonetDB.hg/buildtools/mel/depend.mx: ./depend.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/glue.mx /home/duelafn/MonetDB.hg/buildtools/mel/dependency.mx: ./dependency.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/html.mx /home/duelafn/MonetDB.hg/buildtools/mel/epilogue.mx: ./epilogue.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/iterator.mx /home/duelafn/MonetDB.hg/buildtools/mel/FileInfo.mx: ./FileInfo.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/link.mx /home/duelafn/MonetDB.hg/buildtools/mel/html.mx: ./html.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/ListIterator.mx /home/duelafn/MonetDB.hg/buildtools/mel/iterator.mx: ./iterator.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/mel.mx /home/duelafn/MonetDB.hg/buildtools/mel/ListIterator.mx: ./ListIterator.cc - created echo waiting /home/duelafn/MonetDB.hg/buildtools/mel/link.mx: ./link.cc - created flex /home/duelafn/MonetDB.hg/buildtools/mel/mel.ll waiting bison -y -d /home/duelafn/MonetDB.hg/buildtools/mel/mel.yy || { rm -f waiting ; exit 1 ; } /home/duelafn/MonetDB.hg/buildtools/mel/mel.mx: ./mel.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/mil.mx /home/duelafn/MonetDB.hg/buildtools/mel/glue.mx: ./glue.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/module.mx /home/duelafn/MonetDB.hg/buildtools/mel/mil.mx: ./mil.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/object.mx /home/duelafn/MonetDB.hg/buildtools/mel/module.mx: ./module.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/operator.mx conflicts: 32 reduce/reduce /home/duelafn/MonetDB.hg/buildtools/mel/object.mx: ./object.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/ops.mx /home/duelafn/MonetDB.hg/buildtools/mel/operator.mx: ./operator.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/prelude.mx /home/duelafn/MonetDB.hg/buildtools/mel/prelude.mx: ./prelude.cc - created /home/duelafn/MonetDB.hg/buildtools/mel/ops.mx: ./ops.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/proto.mx ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/symbol.mx if [ -f lex.yy.c ]; then mv lex.yy.c mel.yy.cc ; fi /home/duelafn/MonetDB.hg/buildtools/mel/proto.mx: ./proto.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/symtable.mx /home/duelafn/MonetDB.hg/buildtools/mel/symbol.mx: ./symbol.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/type_arg.mx mv mel.yy.cc mel.yy.cc.tmp /home/duelafn/MonetDB.hg/buildtools/mel/symtable.mx: ./symtable.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/use.mx /home/duelafn/MonetDB.hg/buildtools/mel/type_arg.mx: ./type_arg.cc - created ../Mx/Mx -x C /home/duelafn/MonetDB.hg/buildtools/mel/var_arg.mx /home/duelafn/MonetDB.hg/buildtools/mel/use.mx: ./use.cc - created echo '#include <'"mel_config.h"'>' > mel.yy.cc grep -v '^#include.*[<"]'"mel_config.h"'[">]' mel.yy.cc.tmp >> mel.yy.cc g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT any_arg.o -MD -MP -MF .deps/any_arg.Tpo -c -o any_arg.o any_arg.cc /home/duelafn/MonetDB.hg/buildtools/mel/var_arg.mx: ./var_arg.cc - created g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT atom_arg.o -MD -MP -MF .deps/atom_arg.Tpo -c -o atom_arg.o atom_arg.cc rm -f mel.yy.cc.tmp g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT atom.o -MD -MP -MF .deps/atom.Tpo -c -o atom.o atom.cc if [ -f y.tab.c ]; then mv y.tab.c mel.tab.cc ; fi rm -f waiting g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT atomops.o -MD -MP -MF .deps/atomops.Tpo -c -o atomops.o atomops.cc mv -f .deps/atom.Tpo .deps/atom.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT bat_arg.o -MD -MP -MF .deps/bat_arg.Tpo -c -o bat_arg.o bat_arg.cc mv -f .deps/any_arg.Tpo .deps/any_arg.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT builtin.o -MD -MP -MF .deps/builtin.Tpo -c -o builtin.o builtin.cc mv -f .deps/atom_arg.Tpo .deps/atom_arg.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT command.o -MD -MP -MF .deps/command.Tpo -c -o command.o command.cc mv -f .deps/atomops.Tpo .deps/atomops.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT debug.o -MD -MP -MF .deps/debug.Tpo -c -o debug.o debug.cc mv -f .deps/bat_arg.Tpo .deps/bat_arg.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT depend.o -MD -MP -MF .deps/depend.Tpo -c -o depend.o depend.cc mv -f .deps/builtin.Tpo .deps/builtin.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT dependency.o -MD -MP -MF .deps/dependency.Tpo -c -o dependency.o dependency.cc mv -f .deps/command.Tpo .deps/command.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT epilogue.o -MD -MP -MF .deps/epilogue.Tpo -c -o epilogue.o epilogue.cc mv -f .deps/debug.Tpo .deps/debug.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT FileInfo.o -MD -MP -MF .deps/FileInfo.Tpo -c -o FileInfo.o FileInfo.cc mv -f .deps/depend.Tpo .deps/depend.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT glue.o -MD -MP -MF .deps/glue.Tpo -c -o glue.o glue.cc mv -f .deps/dependency.Tpo .deps/dependency.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT html.o -MD -MP -MF .deps/html.Tpo -c -o html.o html.cc mv -f .deps/epilogue.Tpo .deps/epilogue.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT iterator.o -MD -MP -MF .deps/iterator.Tpo -c -o iterator.o iterator.cc mv -f .deps/FileInfo.Tpo .deps/FileInfo.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT link.o -MD -MP -MF .deps/link.Tpo -c -o link.o link.cc mv -f .deps/iterator.Tpo .deps/iterator.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT ListIterator.o -MD -MP -MF .deps/ListIterator.Tpo -c -o ListIterator.o ListIterator.cc mv -f .deps/ListIterator.Tpo .deps/ListIterator.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT mel.o -MD -MP -MF .deps/mel.Tpo -c -o mel.o mel.cc mv -f .deps/html.Tpo .deps/html.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT mel.tab.o -MD -MP -MF .deps/mel.tab.Tpo -c -o mel.tab.o mel.tab.cc mv -f .deps/link.Tpo .deps/link.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT mel.yy.o -MD -MP -MF .deps/mel.yy.Tpo -c -o mel.yy.o mel.yy.cc y.tab.c:178:1: warning: "MEL_MODULE" redefined In file included from /home/duelafn/MonetDB.hg/buildtools/mel/command.h:26, from /home/duelafn/MonetDB.hg/buildtools/mel/mel.yy:47: /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:1:1: warning: this is the location of the previous definition y.tab.c:179:1: warning: "MEL_PRELUDE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:2:1: warning: this is the location of the previous definition y.tab.c:180:1: warning: "MEL_EPILOGUE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:3:1: warning: this is the location of the previous definition y.tab.c:181:1: warning: "MEL_END" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:4:1: warning: this is the location of the previous definition y.tab.c:182:1: warning: "MEL_COMMAND" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:5:1: warning: this is the location of the previous definition y.tab.c:183:1: warning: "MEL_OPERATOR0" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:6:1: warning: this is the location of the previous definition y.tab.c:184:1: warning: "MEL_OPERATOR" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:7:1: warning: this is the location of the previous definition y.tab.c:185:1: warning: "MEL_OPERATOR1" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:8:1: warning: this is the location of the previous definition y.tab.c:186:1: warning: "MEL_FIXEDATOM" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:9:1: warning: this is the location of the previous definition y.tab.c:187:1: warning: "MEL_ATOM" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:10:1: warning: this is the location of the previous definition y.tab.c:188:1: warning: "MEL_USE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:11:1: warning: this is the location of the previous definition y.tab.c:189:1: warning: "MEL_ATOMOP" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:12:1: warning: this is the location of the previous definition y.tab.c:190:1: warning: "MEL_STRING" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:13:1: warning: this is the location of the previous definition y.tab.c:191:1: warning: "MEL_IDENTIFIER" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:14:1: warning: this is the location of the previous definition y.tab.c:192:1: warning: "MEL_USED" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:15:1: warning: this is the location of the previous definition y.tab.c:193:1: warning: "MEL_NUMBER" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:16:1: warning: this is the location of the previous definition y.tab.c:194:1: warning: "MEL_ANY" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:17:1: warning: this is the location of the previous definition y.tab.c:195:1: warning: "MEL_BAT" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:18:1: warning: this is the location of the previous definition y.tab.c:196:1: warning: "MEL_TYPE" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:19:1: warning: this is the location of the previous definition y.tab.c:197:1: warning: "MEL_VOID" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:20:1: warning: this is the location of the previous definition y.tab.c:198:1: warning: "MEL_BUILTIN" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:21:1: warning: this is the location of the previous definition y.tab.c:199:1: warning: "MEL_OBJECT" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:22:1: warning: this is the location of the previous definition y.tab.c:200:1: warning: "MEL_VARARGS" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:23:1: warning: this is the location of the previous definition y.tab.c:201:1: warning: "MEL_SEP" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:24:1: warning: this is the location of the previous definition y.tab.c:202:1: warning: "MEL_ITERATOR" redefined /home/duelafn/MonetDB.hg/buildtools/mel/mel.tab.h:25:1: warning: this is the location of the previous definition mv -f .deps/glue.Tpo .deps/glue.Po g++ -DHAVE_CONFIG_H -I. -I/home/duelafn/MonetDB.hg/buildtools/mel -g -MT mil.o -MD -MP -MF .deps/mil.Tpo -c -o mil.o mil.cc y.tab.c:150: error: expected identifier before numeric constant y.tab.c:150: error: expected ‘}’ before numeric constant y.tab.c:150: error: expected unqualified-id before numeric constant y.tab.c:175: error: expected declaration before ‘}’ token make[3]: *** [mel.tab.o] Error 1 make[3]: *** Waiting for unfinished jobs.... mv -f .deps/mel.Tpo .deps/mel.Po mv -f .deps/mil.Tpo .deps/mil.Po mv -f .deps/mel.yy.Tpo .deps/mel.yy.Po make[3]: Leaving directory `/home/duelafn/MonetDB.build/mel' make[2]: *** [all] Error 2 make[2]: Leaving directory `/home/duelafn/MonetDB.build/mel' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/duelafn/MonetDB.build' make: *** [all] Error 2

11 years, 8 months

[MonetDB-users] Large Database / Is there hope?

by Dean Serenevy

Hello, I am still having problems compiling from sources, however, I would like to determine whether these is hope in continuing. We have a corpus of about 18,000 documents averaging about 5000 words each. We additionally have stand-off annotations that we would like to add and query against. This totals about 300 million XML elements. We are running 64-bit Linux with 6GiB RAM. Database A: Loading the documents (in batches of 100) as separate collections takes about 30 min and consumes 30GiB disk space in var/MonetDB4/dbfarm. Simple queries against database A take a long time, consume only 5% CPU and heavily work kswapd count( for $d in pf:documents-unsafe() return doc($d)/tCorpus ) # killed after1 hour Database B: Loading the documents (in batches of 100) into a single huge collection takes about 6 hours and consumes 120GiB disk space in var/MonetDB4/dbfarm. Simple queries against Database B take a long time, consume only 5% CPU and heavily work pdflush count( pf:collection("tcorpus")//tCorpus ) # killed after 3 hours My questions: 1. Is there any hope of successfully performing non-trivial queries on either of these databases using MonetDB? 2. If so, Is loading into a single collection or separate collections likely to be preferable? 3. The above work was done using the Jun2010-SP2 SuperBall, which is the only version I have been able to compile. Has any relevant work been done since then on MonetDB4 or any of the XQuery code that might improve performance? Thank you, Dean

11 years, 8 months

[MonetDB-users] MonetDB-client 1.40.1 without Python support?

by W-Mark Kubacki

Hi. I've noticed that MonetDB-client 1.40.1 doesn't ship with Python libraries anymore. Yet there is a --with-python configuration option and Python examples. The corresponding changelog page [1] says nothing about the matter. What happened? -- Mark [1] http://monetdb.cwi.nl/Development/Releases/Oct2010/ [2] https://github.com/wmark/ossdl-overlay

11 years, 8 months

[MonetDB-users] Announcement: New Oct2010 feature release of MonetDB suite

by Sjoerd Mullender

It is not October anymore, but nevertheless, the MonetDB team at CWI/MonetDB BV is pleased to announce the Oct2010 feature release of the MonetDB suite of programs. More information (including release notes) on this release is available at <http://monetdb.cwi.nl/Development/Releases/Oct2010/>. The download location is <http://dev.monetdb.org/downloads/>. -- Sjoerd Mullender

11 years, 8 months

2022

2021

2020

2019

2018

2017

2016

2015

2014

2013

2012

2011

2010

2009

2008

2007

2006

2005

2004

users-list November 2010